1. The post-apocalyptic world of binary containers

    The apocalypse is nigh. Soon, binary executables and containers in object stores will join the many Web-based pipelines and the several virtual machine images on the dystopic wasteland of "reproducible science."


    Anyway.

    I had a conversation a few weeks back with a senior colleague about container-based approaches (like Docker) wherein …

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  2. Data intensive biology in the cloud: instrumenting ALL the things

    Here's a draft PyCon '14 proposal. Comments and suggestions welcome!


    Title: Data intensive biology in the cloud: instrumenting ALL the things

    Description: (400 ch)

    Cloud computing offers some great opportunities for science, but most cloud computing platforms are both I/O and memory limited, and hence are poor matches for …

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