Other articles

  1. Is mybinder 95% of the way to next-gen computational science publishing, or only 90%?

    If you haven't seen mybinder.org, you should go check it out. It's a site that runs IPython/Jupyter Notebooks from GitHub for free, and I think it's a solution to publishing reproducible computational work.

    For a really basic example, take a look at my demo Software Carpentry lesson. Clicking …

    read more

    There are comments.

  2. Transcriptomic analysis with Docker containers and data volumes

    As part of our Docker hands-on workshop earlier this month, I learned a lot about building Dockerfiles, running Docker containers on remote hosts with docker-machine, and using data volumes to manage data in remotely hosted Docker containers.

    During and after the workshop, I put together Docker images (and, more importantly …

    read more

    There are comments.

  3. Page 1 / 1

    Proudly powered by pelican, which uses python.

    The theme is subtlely modified from one by Smashing Magazine, thanks!

    For more about this blog's author, see the main site or the lab site

    While the author is employed by the University of California, Davis, his opinions are his own and almost certainly bear no resemblance to what UC Davis's official opinion would be, had they any.