I recently gave an informal talk on Software Carpentry for the Caltech e-Science 101 course. Since even "Intro Software Carpentry" is a whole course of study, I obviously couldn't cover much, but I tried to motivate people to get interested. And, of course, I pushed testing. TESTING, DAMNIT!
Anyway, here …
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So, next May I'm starting as an assistant professor split between the Computer Science and Microbiology and Molecular Genetics departments at Michigan State U., and I'm interested in attracting as many good CS grad applicants as I can from the open source and bioinformatics communities. (I would also like to …
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Rob Campbell found me by google, and pointed me towards his blog, Science and Software. Funny, well written, and very apropos! Why isn't there more software, commercial or otherwise, for labs?
There has been a lot of local interest (i.e. two or three people have discussed it at various …
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After our long software licensing discussion on the biology-in-python list, I realized that I wanted something different in a license for scientific software.
Specifically, I would like to attach the following clause to either a BSD or L/GPL style license:
Publications relying on derivative works of this software must …read more
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This month the newly minted biology-in-python mailing list erupted into a discussion of licenses. There was some confusion about the goal of the discussion, for which I'm largely responsible: we didn't make it clear that we were talking about licenses for code and content posted on the bio.scipy.org …
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In the spirit of cleaning up my desktop... here's a PDF of my talk on Cartwheel at SciPy 2007.
--titus
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To get people talking, I've created a "biology-in-python" mailing list. You can subscribe here: http://lists.idyll.org/listinfo/biology-in-python, and you can post to it at bip@lists.idyll.org once you're a member.
This list is a tool/package/library-agnostic list, for people who use Python to work …
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