6. Classifying genome bins using a custom reference database, part II

   Classifying genome bins with a custom database! Part 2!

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7. Classifying genome bins using a custom reference database, part I (Saturday Morning Bioinformatics)

   Classifying genome bins! With pictures!

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8. Taxonomic examinations of genome bins from Tara Oceans (Honorary Sunday Morning Bioinformatics)

   An initial taxonomical investigation of the genome bins.

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9. Comparing genome sets extracted from metagenomes (Sunday Morning Bioinformatics).

   Two different binning procedures, on different data, produce somewhat different bins. Duh.

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10. Is your bioinformatics analysis package Big Data ready?

    Plan for incremental data updates when building your tools.

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11. A post about k-mers - this time for taxonomy!

    A brief literature review: MetaPalette, mash/MinHash, and Kraken.

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12. Thoughts on my Salmon review

    I was one of the reviewers of the Salmon paper by Patro et al., 2017, Salmon provides fast and bias-aware quantification of transcript expression, and I posted my review in large part because of Lior Pachter's blog post levying charges of intellectual theft and dishonest against the Salmon authors. More …

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