The other day, I purchased a new car from the car company down the street. This was a small boutique shop, and their marketing brochure was slick -- 0-60 in 6 seconds, heated seats, a good safety rating -- and the technical reviews were amazing -- "Never seen anything like it! Really novel …
read moreThere are comments.
I just left the NAS meeting on Integrating Environmental Health Data to Advance Discovery, where I was an invited speaker. It was a pretty interesting meeting, with presentations from speakers who worked on chemotoxicity data, pollution data, exposure data, and electronic health records, as well as a few "outsiders" from …
read moreThere are comments.
I just left the NAS meeting on Integrating Environmental Health Data to Advance Discovery, where I was an invited speaker. It was a pretty interesting meeting, with presentations from speakers who worked on chemotoxicity data, pollution data, exposure data, and electronic health records, as well as a few "outsiders" from …
read moreThere are comments.
For each of the last two summers, I've returned from co-teaching our Analyzing Next-Generation Sequencing Data course, slept for 48 hours straight, and then hunkered down and bunkered up to write grants. (To be clear, sometimes this bunkering up involves travelling out to California and sitting on my in-laws' beach …
read moreThere are comments.
We just posted yet another pre-submission paper to arXiv.org:
Assembling large, complex environmental metagenomes
Authors: Adina Chuang Howe, Janet Jansson, Stephanie A. Malfatti, Susannah Tringe, James M. Tiedje, and C. Titus Brown
Abstract:
The large volumes of sequencing data required to deeply sample …read more
There are comments.
We just posted another pre-submission paper to arXiv.org:
Illumina Sequencing Artifacts Revealed by Connectivity Analysis of Metagenomic Datasets
Authors: Adina Chuang Howe, Jason Pell, Rosangela Canino-Koning, Rachel Mackelprang, Susannah Tringe, Janet Jansson, James M. Tiedje, and C. Titus Brown
Abstract:
Sequencing errors and …read more
There are comments.
This post can be referenced and cited at the following DOI: http://dx.doi.org/10.6084/m9.figshare.98198.
For a few months, the Trinity list was awash with discussions about how to use digital normalization to lower the memory and compute requirements for mRNASeq assembly. At some point …
read moreThere are comments.